Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22409g00001 CGTGATGGCTTAAAGGCATGGGAGACATTGAAGAACAAATCATCTGAAATAGATCTCGTATTAACAGAAGTGGAGTTGCCATCAATATCTGGTTTTACATTACTTACTTCAATCATGGAACTTGACAATTGCAAAAACATTCCTGTCATAAATATGGCTATTGCGTTAGGGTTTATTCTCAATTTTCATGGTGTAATGTGCAGTGATGTCTTCTAA 216 0.3565 RDGLKAWETLKNKSSEIDLVLTEVELPSISGFTLLTSIMELDNCKNIPVINMAIALGFILNFHGVMCSDVF 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22409g00001 71 Gene3D - 1 55 - -
Trme22409g00001 71 SUPERFAMILY CheY-like 2 52 IPR011006 -
Trme22409g00001 71 ProSiteProfiles Response regulatory domain profile. 1 71 IPR001789 GO:0000160
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22409g00001 2 53 Response Regulator Gene Family AT5G24470 71.154 3.35e-20 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme22409g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22409g00001 K12130 - gmx:100779346 86.2705