Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22398g00001 TCTTGCCCTCATGTGGCCGGCATTGCAGGACTTCTCAAAACAAAGCATCCTAATTGGAGTCCGGCAGCTATTAAATCAGCTATCATGACCACAGCAACTAAACTAGATAACACGAACCGGCCAATTCAGGATGCATTTGAAAAAACACCAGCAACTGCCTTTGCTTATGGTTCAGGGCATGTTCAACCAGACCTTGCAATAGATCCTGGACTTGTTTATGATCTAGGCATCAAGGATTACTTGAATTTTCTATGTGCTTATGGATACGACCAACAACTCATATCAGCACTTAATTTCAACGGTACATTTGTTTGTTCTGGAACTCACAGCATAACAGACTTTAACTACCCTTCAATCACGTTACCGAATCTTGGGTTAAATGTCGTTAATGTCAGTCGGACAGTCACCAATGTTGGGTCACCAAGCACATATGTAGCAAAAGCTCAATTGTTTGGATATAAAATTGTTGTCGTACCAAATACCTTGACATTCAAGAAACTTGGTGAAAAGAAGACATTCCAAGTTATTGTGCAGGCAACAAATGTGACTCCACGGAAGGAATACCAATTTGGAGATTTGCAATGGACAGATGGAAAACACATTGTAAGGAGTCCTATCACAGTACAGCGCAAATAA 636 0.4072 SCPHVAGIAGLLKTKHPNWSPAAIKSAIMTTATKLDNTNRPIQDAFEKTPATAFAYGSGHVQPDLAIDPGLVYDLGIKDYLNFLCAYGYDQQLISALNFNGTFVCSGTHSITDFNYPSITLPNLGLNVVNVSRTVTNVGSPSTYVAKAQLFGYKIVVVPNTLTFKKLGEKKTFQVIVQATNVTPRKEYQFGDLQWTDGKHIVRSPITVQRK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22398g00001 211 Gene3D - 84 210 - -
Trme22398g00001 211 Gene3D Peptidase S8/S53 domain 1 80 IPR036852 GO:0004252|GO:0006508
Trme22398g00001 211 ProSiteProfiles Serine proteases, subtilase domain profile. 1 67 - -
Trme22398g00001 211 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 208 IPR045051 -
Trme22398g00001 211 SUPERFAMILY Subtilisin-like 1 73 IPR036852 GO:0004252|GO:0006508
Trme22398g00001 211 Pfam Fibronectin type-III domain 113 208 IPR041469 -
Trme22398g00001 211 Pfam Subtilase family 1 43 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22398g00001 Trme-Chr22398 604 1310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22398g00001 1 209 Subtilisin-like Serine Gene Family AT2G04160 56.398 2.24e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22398g00001 - - tpra:123892266 390.193