Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme2237g00001 | ATGGATAAAGCAAAGTACAAGAGTGTTATTCATGCTTGTTCACTGAAAAAGGACCTAGAACTTTTCTCACATGGAGACCAAACAATTATTGGTGACAGAGGTATAAATTTGAGTGGTGGCCAGAAGCAGCGGATTCAGCTTGCACGAGCACTCTACCAAGATGCTGATATTTATCTCCTTGATGATCCCTTTAGTGCGCTTGATGCCCACACTGGATCAGAATTATTCAGAGAGTATGTATTGTCAGCACTAGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCAGCTGCTGATATGATACTGGTTCTTAAAGAAGGCCAAATCATACAGGCAGGAAAGTATGATGATCTTTTACAGGCAGGAACAGATTTTAGAACTCTTGTTTCAGCTCACCATGAAGCAATAGAGGCTATGGACATTCCTAATCACTCCTCCTCGGAAGATTCAGATGAAAATGAGTCCTTGGATACATCTATTATGGCCATGAAGAAATCTATTTCTTCTGTAAATATTAACAGTTTGGCGAAGGAAGTTCACGAGGGATCATCAGATCTTAAAGAAATAAAGGAAAAGAAGAAGACAAAACGCTCGAGAAAAAAACAGCTTGTTCAGGAAGAGGAGAGGGTTAGGGGTAGAGTCAACATGAAGGTGTACTTGTCTTACATGGCTGCCGCATATAAAGGCTTATTGATTCCCCTCATAATCATTGCACAATCATTATTTCAGTTCCTTCAGATAGCCAGCAATTGGTGGATGGCTTGGGCAAATCCTCAAACAGAGGGAGACGAACCCAAAGTAGCTCCCACAACTCTTCTTCTCGTTTACATGGCCCTTGCCTTTGGCAGCTCATGCTTCATATTTGTAAGGGCTGTTCTTGTGGCTACGTTTGGCCTAGCAGCAGCACAGAAGCTATTTTTCAACATGCTTAGAAGTATTTTCCATGCACCAATGTCTTTCTTTGACTCTACACCAGCTGGAAGGATCCTGAATCGTGTTTCAATTGATCAAAGTGTTGTGGATCTTGATATTCCTTTTAGACTTGGAGGGTTTGCTTCATCAACGATACAACTTATTGGTATTGTTGCAGTAATGTCAGAAGTTACATGGCAAGTTTTGCTCCTTGTAGTTCCAATGGCAATTGTTTGTTTGTGGATGCAGAAATACTACATGGCTTCATCAAGGGAACTGGTACGTATTGTAAGCATCCAGAAATCTCCAATTATACAACTTTTTGGTGAATCAATTGCTGGAGCATCCACTATCAGAGTCTTGCAGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTTTCAACTTTTGTATTTGCTTTCTGCATGGTTTTACTTGTGA | 1365 | 0.4073 | MDKAKYKSVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRIQLARALYQDADIYLLDDPFSALDAHTGSELFREYVLSALADKTVIFVTHQVEFLPAADMILVLKEGQIIQAGKYDDLLQAGTDFRTLVSAHHEAIEAMDIPNHSSSEDSDENESLDTSIMAMKKSISSVNINSLAKEVHEGSSDLKEIKEKKKTKRSRKKQLVQEEERVRGRVNMKVYLSYMAAAYKGLLIPLIIIAQSLFQFLQIASNWWMAWANPQTEGDEPKVAPTTLLLVYMALAFGSSCFIFVRAVLVATFGLAAAQKLFFNMLRSIFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASSTIQLIGIVAVMSEVTWQVLLLVVPMAIVCLWMQKYYMASSRELVRIVSIQKSPIIQLFGESIAGASTIRVLQLLSGSACAWNYFQLLYLLSAWFYL | 454 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme2237g00001 | 454 | FunFam | ABC transporter C family member 5 | 199 | 432 | - | - | |
Trme2237g00001 | 454 | Pfam | ABC transporter | 25 | 64 | IPR003439 | GO:0005524 | |
Trme2237g00001 | 454 | SUPERFAMILY | ABC transporter transmembrane region | 235 | 431 | IPR036640 | GO:0005524|GO:0016020 | |
Trme2237g00001 | 454 | Pfam | ABC transporter transmembrane region | 240 | 430 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Trme2237g00001 | 454 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 238 | 427 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Trme2237g00001 | 454 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 134 | IPR027417 | - | |
Trme2237g00001 | 454 | CDD | ABC_6TM_ABCC_D2 | 236 | 427 | IPR044726 | GO:0140359 | |
Trme2237g00001 | 454 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 1 | 429 | - | - | |
Trme2237g00001 | 454 | Gene3D | - | 1 | 159 | IPR027417 | - | |
Trme2237g00001 | 454 | ProSitePatterns | ABC transporters family signature. | 37 | 51 | IPR017871 | GO:0005524|GO:0016887 | |
Trme2237g00001 | 454 | Gene3D | ABC transporter type 1, transmembrane domain | 160 | 432 | IPR036640 | GO:0005524|GO:0016020 | |
Trme2237g00001 | 454 | Coils | Coil | 190 | 213 | - | - | |
Trme2237g00001 | 454 | FunFam | Multidrug resistance associated protein, putative | 1 | 69 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme2237g00001 | Trme-Chr2237 | 72 | 2640 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme2237g00001 | 25 | 170 | Calmodulin-binding Proteins | AT2G36910 | 33.557 | 7.57e-18 | 84.7 |