Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme223737g00001 ATGATCACGCGTGCCAAGAACATGTTGGAGTTGGAATGCCCCGGCGTGGTCTCTTGTTCTGACATACTTGCCACAGCGACGCGTGATCTTGTTGTTGTTGTTGGCGGCCCATTCTATGAGTTAGACTTTGGTCGAAAAGACAGTGTAGAGTCCAAAGCAATCGACGCAGAAAACAAATATCCATTACCAACTATGACAATGTCTCAG 207 0.4686 MITRAKNMLELECPGVVSCSDILATATRDLVVVVGGPFYELDFGRKDSVESKAIDAENKYPLPTMTMSQ 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme223737g00001 69 PANTHER - 2 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme223737g00001 69 PRINTS Plant peroxidase signature 16 26 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme223737g00001 69 PRINTS Plant peroxidase signature 35 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme223737g00001 69 Gene3D - 1 60 - -
Trme223737g00001 69 ProSiteProfiles Plant heme peroxidase family profile. 1 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme223737g00001 69 SUPERFAMILY Heme-dependent peroxidases 2 68 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme223737g00001 69 Pfam Peroxidase 2 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme223737g00001 69 PRINTS Haem peroxidase superfamily signature 35 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme223737g00001 69 PRINTS Haem peroxidase superfamily signature 17 34 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme223737g00001 Trme-Chr223737 166 372 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme223737g00001 1 67 Peroxidase AT4G17690 59.701 6.81e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme223737g00001 K00430 - psom:113297980 96.2857