Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme223530g00001 TATAGTGTGTCTTTAAGGAATGAAGCATTGACTATATGGAAGAGATTGGGCGAAGCAATTAGAGGGATTTTCATGGAGTTGGAGAATTTGATCCGCAGAGATCCGGCTAAGGCGGCTGTTCCCGGTGGTGGACTTCACCCGATTACCCGATATGTGATGAACTATCTCCGCGCCGCGTGTCGGTCAAGGCAAACATTGGAGCAAGTGTTTGAAGACTATGGACATCCATTGAAGGAATACCCTAAAATTGATGACAGAATGTCTTCATCTTCCTCTCTATCAGTGCAAATGGATTGGATTATGGAGCTATTAGAGAGCAATTTGGAAG 328 0.4451 YSVSLRNEALTIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGLHPITRYVMNYLRAACRSRQTLEQVFEDYGHPLKEYPKIDDRMSSSSSLSVQMDWIMELLESNLE 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme223530g00001 109 Gene3D Exocyst complex component Exo70 1 109 - -
Trme223530g00001 109 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 109 IPR004140 GO:0000145|GO:0006887
Trme223530g00001 109 Pfam Exo70 exocyst complex subunit 4 109 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme223530g00001 109 SUPERFAMILY Cullin repeat-like 5 109 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme223530g00001 Trme-Chr223530 82 409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme223530g00001 1 109 EXO70 exocyst subunit family AT5G58430 77.273 1.59e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme223530g00001 K07195 - gmx:100803694 191.43