Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22346g00001 TTAGTGCATTCTTTCAGATTAGCGCTTCCTCGTTACCGTACATACTCCAATCTAACCGGTTCAATCTCACAGTTTCCTTGTTGCAGAACCTTTGGCGCCGTTTGCATTTCTCATGTGTTTCGAGATGCATCATATTCTTACCAGATATGTAAAGCACTAGCTTACTTTCATAACTGTGTTGGAGTGTCTCATAGGGACATAAAACCTCAAAATGTCCTGAGAAACTACAAGAACCGAGAGTGTAGAAGATCAATGGGACATACCGTCAGAGTTTCCCGCGGATTTAGCTGCGGAAACACGTTTTCTGAGGAATTTCCTGCGGATATTACTGCGGAATTTTCGCAGGAAAGTTTGCTGCGGGTTGTTTCTCTTTTTTTGGCAACAAATTCCGCAGGAAAGTTTCCTGAGGATTCTAAAAACCGCAGGAAACAATTACCCACGAAGGAAAATCCGCGGGAAAACTGA 465 0.4301 LVHSFRLALPRYRTYSNLTGSISQFPCCRTFGAVCISHVFRDASYSYQICKALAYFHNCVGVSHRDIKPQNVLRNYKNRECRRSMGHTVRVSRGFSCGNTFSEEFPADITAEFSQESLLRVVSLFLATNSAGKFPEDSKNRRKQLPTKENPREN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22346g00001 154 Gene3D Transferase(Phosphotransferase) domain 1 37 150 - -
Trme22346g00001 154 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme22346g00001 154 SUPERFAMILY Protein kinase-like (PK-like) 44 77 IPR011009 -
Trme22346g00001 154 MobiDBLite consensus disorder prediction 135 154 - -
Trme22346g00001 154 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22346g00001 Trme-Chr22346 412 1249 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Trme22346g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22346g00001 K03083 - osa:4326720 62.003