Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22331g00001 ATGATAAAGGTGAAAACTTGGGCAGAACTGTTGAATACTTTCTGCACCAGTGGAAAACTTGAGCTGGAACTGATGTACAAAGTACAGATGCAATGCTATGAGGATGCTAAACTGATGAAACTGTTCCCTGAGATTATTAGATCTCTCTATGACCAAGATGTGCTGGCTGAAGATACCATTCTTCATTGGTTCCGTAAAGGAACAAACCCCAAAGGAAGGCAAACCTTTGTGAAGGCACTGGAACCCTTTGTTAATTGGCTGGAAGAGGCTGAAGAAGAGGAGTGA 285 0.4246 MIKVKTWAELLNTFCTSGKLELELMYKVQMQCYEDAKLMKLFPEIIRSLYDQDVLAEDTILHWFRKGTNPKGRQTFVKALEPFVNWLEEAEEEE 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22331g00001 94 SMART 542_3 8 93 IPR003307 GO:0005515
Trme22331g00001 94 Gene3D - 2 94 - -
Trme22331g00001 94 ProSiteProfiles W2 domain profile. 1 94 IPR003307 GO:0005515
Trme22331g00001 94 Pfam eIF4-gamma/eIF5/eIF2-epsilon 21 94 IPR003307 GO:0005515
Trme22331g00001 94 SUPERFAMILY ARM repeat 4 91 IPR016024 -
Trme22331g00001 94 PANTHER BASIC LEUCINE ZIPPER AND W2 DOMAIN-CONTAINING PROTEIN 3 94 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22331g00001 4 90 Eukaryotic Initiation Factors Gene Family AT2G34970 33.708 3.82e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22331g00001 - - tpra:123883930 191.43