Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme223274g00001 TCACTTAAATTGTACAGGCTAGATAAAACTAAGTTCTATGTCGTTGGTGCTGGACTCTTTACTGGTGTTACAGTTGCACTTTACCCGGTTTCAGTTGTGAAAACTAGGCTGCAGGTAGCAACAAAGGCTTCTATAGAGAAAAATGCCTATTCTGTTGCAAAAGGATTACTTAAAACAGACGGCATCCCTGGTTTGTATAAAGGGTTTGGCACCGTTATCACTGGTGCAATACCGGCCAGAGTCATATTCATGTCGGTTCTAGAGACCACAAAGGTGTATGCCTTTAAAATGCTGGAACCGTTTGGACTATCTGGAACTACTCAGGCTGCCTTAGCAAATGGATTTGCAGGCATGACATCGTCACTTTTTGCTCAATCTGTGTTTGTACCAATTGATGTG 399 0.4236 SLKLYRLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKASIEKNAYSVAKGLLKTDGIPGLYKGFGTVITGAIPARVIFMSVLETTKVYAFKMLEPFGLSGTTQAALANGFAGMTSSLFAQSVFVPIDV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme223274g00001 133 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 93 IPR018108 -
Trme223274g00001 133 Pfam Mitochondrial carrier protein 17 96 IPR018108 -
Trme223274g00001 133 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 133 - -
Trme223274g00001 133 Gene3D Mitochondrial carrier domain 6 133 IPR023395 -
Trme223274g00001 133 SUPERFAMILY Mitochondrial carrier 8 124 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme223274g00001 Trme-Chr223274 10 408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme223274g00001 5 133 Chloroplast and Mitochondria Gene Families AT5G15640 72.093 8.20e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme223274g00001 K15121 - gmx:100782750 215.698