Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme223174g00001 TTTGGATATATTGTCTTGACAACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGGAGAAAGAATGCTGGTGGTAAAGTGTTGGGTTTTTTCTACTAG 99 0.404 FGYIVLTTSAGIMDHEEARRKNAGGKVLGFFY 32
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme223174g00001 32 ProSitePatterns Ribosomal protein S8 signature. 2 19 IPR000630 GO:0003735|GO:0005840|GO:0006412
Trme223174g00001 32 Pfam Ribosomal protein S8 1 32 IPR000630 GO:0003735|GO:0005840|GO:0006412
Trme223174g00001 32 SUPERFAMILY Ribosomal protein S8 1 32 IPR035987 GO:0003735|GO:0005840|GO:0006412
Trme223174g00001 32 Gene3D - 1 32 - -
Trme223174g00001 32 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 31 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme223174g00001 1 32 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.875 1.71e-17 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme223174g00001 K02957 - zof:122047494 68.9366