Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme222371g00001 ATGGGTATTCGTCTGCCATTTATGGTTCTTCATGCAAACAAGATATTCAAGTCATCATCACAGCATCTACATAGTAGAAATCATTCCAATGTTCCAAAGGGACATGTAGCTGTCTATGTTGGAGAATCTCAGAAGAAGCGTTTTGTGGTTCCAATATCTTACTTAAACCATCCTTCATTTCTTGATTTGTTAAACCGTGCTGAAGAAGAATTTGGCTACAATCATCCAATGGGTGGTCTCACTATTCCTTGCAAAGAAGAAGCATTTATTAATCTTACATCTCAACTGCGCGAGTGCATCTTGAAACATTGA 312 0.3782 MGIRLPFMVLHANKIFKSSSQHLHSRNHSNVPKGHVAVYVGESQKKRFVVPISYLNHPSFLDLLNRAEEEFGYNHPMGGLTIPCKEEAFINLTSQLRECILKH 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme222371g00001 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 96 IPR003676 GO:0009733
Trme222371g00001 103 Pfam Auxin responsive protein 15 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme222371g00001 Trme-Chr222371 31 342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme222371g00001 30 103 Calmodulin-binding Proteins AT3G43120 47.297 3.72e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme222371g00001 K14488 - gmx:102663761 179.489