Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme222164g00001 ATGTCGGGGCAATCACAGCGTTTGAATGTGGTCCCCACAGTGACAATGCTTGGTGTTGTGAAAGCACGTTTGGTTGGTGCAACAAGAGGCCATGCACTTCTGAAGAAGAAAAGTGATGCNNNNNNNNNNANNNNNNNNNNGATCCTGAAAAAGATTGTTTCAACAAAGGAATCAATGGGTGATATCATGAAAACATCTTCATTTGCGTTAACTGAGGCTAAGTATGTAGCTGGTGATAACATCAAGCATGTCGTGCTTGAGAATGTTAAGGAAGCTTCACTCAGGGTGCGTTCTCGTACTGAGAACGTAGCTGGAGTGAAGCTTCCAAAATTTGAGTATTCTGCTGATGGTGAGGCATCGAAGAATGACCTTACCGGGTTGGCTAGAGGTGGTCAGCAGGTGCAGCAGTG 410 0.4341 MSGQSQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDAXXXXXXXILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFEYSADGEASKNDLTGLARGGQQVQQ 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme222164g00001 136 NCBIfam V-type ATP synthase subunit D 9 136 IPR002699 GO:0046961
Trme222164g00001 136 Pfam ATP synthase subunit D 17 135 IPR002699 GO:0046961
Trme222164g00001 136 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 136 IPR002699 GO:0046961
Trme222164g00001 136 Gene3D - 1 136 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme222164g00001 1 135 Primary Pumps ATPases(2) AT3G58730 79.259 3.76e-74 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme222164g00001 K02149 - gmx:100801612 232.261