Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22129g00001 GAACTGGTTACTTCTTACGGTCGTCATCTTGAAAAAAGACATGATATGATTCTTGGGACGCTGTTTGAACAAGGGACATACAAGAAACTCTATAGCTATCGACATCTTATAAATGGTTTTGCTGTTCATATTTCCCCGGAACAGGTGAAGTCTTCTGTTGTTAGTTATCCTTTTGCTATTGCAGAAACTTTAAGCCATGCTTCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAAGAGACTTACCACACATACTCCACAATTTTTAGGGCTTCCAACTGGGGTATGGCCAACTGGAGGTGGCTTTGATAGAGCCGGAGAAGATATTGTTATTGGATTTGTAGACTCAGGGATATATCCTCATCACCCGAGTTTTGCAACTCATAATTCTGAACCATATGAGCCAGTTCCAAAGTATAGAGGTAAATGTGAAGTTGATCCAGATACTAAAAGAAATTTCTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCACAAGCTGCAATAGCTTCTGGAGCATTCAACCCTTCCGTTGATTTTGCGTCTCCTCTAGATGGGGATGGACATGGAAGGTTAGAGCAAGTCATTATAACTTAA 600 0.4083 ELVTSYGRHLEKRHDMILGTLFEQGTYKKLYSYRHLINGFAVHISPEQVKSSVVSYPFAIAETLSHASGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATHNSEPYEPVPKYRGKCEVDPDTKRNFCNGKIVGAQHFAQAAIASGAFNPSVDFASPLDGDGHGRLEQVIIT 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22129g00001 199 Gene3D Peptidase S8/S53 domain 109 191 IPR036852 GO:0004252|GO:0006508
Trme22129g00001 199 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 112 123 IPR023827 -
Trme22129g00001 199 Pfam Peptidase inhibitor I9 6 50 IPR010259 -
Trme22129g00001 199 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 192 IPR045051 -
Trme22129g00001 199 SUPERFAMILY Subtilisin-like 33 192 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22129g00001 Trme-Chr22129 221 895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22129g00001 1 191 Subtilisin-like Serine Gene Family AT2G19170 73.298 2.62e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22129g00001 - - tpra:123910073 361.688