Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22117g00001 GTTGAGTATCTTGTCCTTGATGAATCTGATAAGCTATTTGAGCCGGGATTGTTCACGCAGATTGATTCTATTATCAAAGCATGCACAAATCCCTCAATAATACGCTCTCTGTTCAGTGCTACTTTACCTGATTTTGTTGAAGATCGTGCTCGAGAACTCATGCATGATGCTGTTCGGGTAATTGTTGGCAGGAAGAATATGGCTTCTGAAACAATTAAGCAAAAGTTGGTTTTTACGGGAAGTGAAGAAGGAAAACTTATAGCAATTCGGCAAAGTTTTGCAGAGGTTGTTTGTCTCACAACTTGA 306 0.3954 VEYLVLDESDKLFEPGLFTQIDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRKNMASETIKQKLVFTGSEEGKLIAIRQSFAEVVCLTT 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22117g00001 101 Gene3D - 1 76 IPR027417 -
Trme22117g00001 101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 63 IPR027417 -
Trme22117g00001 101 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 60 IPR014001 -
Trme22117g00001 101 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 1 83 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22117g00001 1 86 Eukaryotic Initiation Factors Gene Family AT3G13920 36.047 4.74e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22117g00001 K14779 - gmx:100778285 176.792