Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme221018g00001 ATGAGCTTAGCATTTGCTAAAGAAGCAGTGACTGTGAAACCAGGTGCATGTGGAACAGTTGTAAGAAATGCAGAGATGAAGATTGTGGATCCTGAAACTGGTAATTCTTTACCTAGAAACCAATCTGGTGAAATATGCATAAGAGGAGACCAGATCATGAAAGGTTATCTAAATGATGTGGAGGCAACAGAGAGAACAATAGACAAAGAAGGTTGGTTGCATACAGGTGATATTGGGTATATTGACGATGACGATGAGTTATTCATTGTTGATAGATTGAAGGAATTGATCAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAAGCTCTTCTTCTTTCTCATCCCAAAATCTCTGATGCTGCTGTTG 373 0.3887 MSLAFAKEAVTVKPGACGTVVRNAEMKIVDPETGNSLPRNQSGEICIRGDQIMKGYLNDVEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme221018g00001 124 Pfam AMP-binding enzyme 8 99 IPR000873 -
Trme221018g00001 124 SUPERFAMILY Acetyl-CoA synthetase-like 9 124 - -
Trme221018g00001 124 Gene3D - 1 94 IPR042099 -
Trme221018g00001 124 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 124 - -
Trme221018g00001 124 Gene3D - 95 124 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme221018g00001 Trme-Chr221018 1 373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme221018g00001 1 124 Monolignol Biosynthesis Gene Families AT3G21240 80.645 4.66e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme221018g00001 K01904 - gmx:547944 238.81