Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22089g00001 GCTTCTAGGATTGTTCCTCTTGATCATAGTCAGATAAAAACCCTAGTGCAGGGGACATGGGGGTACCTTGACCCAGAATATTTCCATACAAGCAAATTAACAGAGAAGAGTGACGTCTATAGTTTTGGGGTTGTACTAGCAGAGCTACTGACAGGAAAGAAGGCACTATCTTTTAGCAGGCCAGAGCTAGACAGAAACCTTGCAGTGTATTTTGTTTCTTCGATGAAAGAGGGTCGATTACATCATATTTTGGACAAAAATATAGATGAGGCGAATATTGAGCAACTAAAGGAAGTTGCTCATATTGCAGAAAGATGTTTAAGGGTGAAGGGTGAGAAAAGACCAACCATGAGAGAAGTGGCAATGGAATTAGAGGCAATATTAGTTTTTGAAGAGCATCCTTGGGGAAGTGGCAATTTGTCTTCAGAAGAGACTGATAACTTGTTCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNTTCAAACTCTTATAACATAAACCTTGCATAG 525 0.3638 ASRIVPLDHSQIKTLVQGTWGYLDPEYFHTSKLTEKSDVYSFGVVLAELLTGKKALSFSRPELDRNLAVYFVSSMKEGRLHHILDKNIDEANIEQLKEVAHIAERCLRVKGEKRPTMREVAMELEAILVFEEHPWGSGNLSSEETDNLFXXXXXXXXXXXXXXXXSNSYNINLA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22089g00001 174 SUPERFAMILY Protein kinase-like (PK-like) 8 124 IPR011009 -
Trme22089g00001 174 Gene3D Transferase(Phosphotransferase) domain 1 1 135 - -
Trme22089g00001 174 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme22089g00001 174 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 128 IPR045274 GO:0007166
Trme22089g00001 174 Pfam Protein tyrosine and serine/threonine kinase 20 124 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22089g00001 Trme-Chr22089 2 526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22089g00001 1 135 Receptor kinase-like Gene Family AT1G21230 56.934 1.23e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Trme22089g00001 PK_Tyr_Ser-Thr 3.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22089g00001 - - tpra:123909375 252.677