Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme220867g00001 ATGCTTGAAACAACTCTTGTTGCTCTTCAAGATATAATGCTTGATAAAGTTCTTGATGAAGCTGGTAGAAAGATTCTTTGCTCTGAATTCTCTAAGATAATGCAACAGGGTTATGCATATCTGCCAGCAGGGTTATGTGTCTCAAGCATGAATAGGCCAGTGTCTTATGAGCAAGCCATTGCATGGAAAGTTCTCAATGATGATGATGCC 210 0.3952 MLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYAYLPAGLCVSSMNRPVSYEQAIAWKVLNDDDA 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme220867g00001 70 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 69 IPR044830 GO:0003700
Trme220867g00001 70 Pfam MEKHLA domain 1 69 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme220867g00001 Trme-Chr220867 1 299 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme220867g00001 1 70 Homeobox Transcription Factor Family AT1G30490 77.143 1.76e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme220867g00001 K09338 - jre:108996578 136.346