Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme22077g00001 ATGGACCTTTTCAATGAATGCATGAAGACAGTTGAGTGTTGTCTTACCGACTCTAAGATGGACAAGAGTAGTGTAAATGATGTTGTCCTTGTTGGGGGTTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGACTTTTTCATGGGAAAGGATCTGTGTAAGAGCATCAACCCTGATGAGGCTGTTGCTTTTGGTGCAGCCGTGCAGGCTGCTTTGTTGAGTGATGAAATTAAAAATGCTCCAAACCTGGTGTTGATCGATGTTACACCACTGTCTTTAGGTTTTGGGCAAAAACAAGATTGCATTCATGTATTGATTCCTAGGAACACTACTATACCTGTCAAGAAGACAGAGCGATGTACTACAGTTACGGACAACCAATCTTTTGTCTTAATCAGTGTTTATGAGGGGGAGAGAACTAGAGCCAGTGACAACAATCTGCTTGGTTCTTTCCGTCTCTTTGGGTTGCAACCCGCACCTCGTGGCCATCCTGTTGAGGTGTGTTTTGCTGTTGATGAAAGTGGCATTTTGACAGTCTCTGCCAAGGAACTTTCCACTGGCAATACAAATGAGATTACAATAACCAATTATAGAGAAAGGCTATCAACAGAAGAAATTAAAAAATTGATTGAAGAAGCTGAGAATTACCGTGCTGAAGATAAGAAATTCCTAGAGATGGCTAGAGTAAAGAATGCATTGGATGATTGTGTTTACAAAATTGAAACTGCTTTAAAGAAGCCGAATATAAACTTGAAGCTTACCACACAAGAGCATGCGGAGATCAATTCTGCAATTATAAGGGTCAAAGATTTGCTTGGTGAGAATGACCTGCACGAAGTAGAAATTCTTGAGGATCATTTGAAGGAGCTCAAAAGTATGTTTATAAACACTATAGCCAAGATTGGCTAG 912 0.4057 MDLFNECMKTVECCLTDSKMDKSSVNDVVLVGGSSRIPKVQQLLQDFFMGKDLCKSINPDEAVAFGAAVQAALLSDEIKNAPNLVLIDVTPLSLGFGQKQDCIHVLIPRNTTIPVKKTERCTTVTDNQSFVLISVYEGERTRASDNNLLGSFRLFGLQPAPRGHPVEVCFAVDESGILTVSAKELSTGNTNEITITNYRERLSTEEIKKLIEEAENYRAEDKKFLEMARVKNALDDCVYKIETALKKPNINLKLTTQEHAEINSAIIRVKDLLGENDLHEVEILEDHLKELKSMFINTIAKIG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme22077g00001 303 FunFam Heat shock 70 kDa protein 77 231 - -
Trme22077g00001 303 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 81 235 IPR029047 -
Trme22077g00001 303 Gene3D - 58 72 - -
Trme22077g00001 303 Pfam Hsp70 protein 2 294 IPR013126 GO:0005524|GO:0140662
Trme22077g00001 303 SUPERFAMILY Actin-like ATPase domain 2 74 IPR043129 -
Trme22077g00001 303 PANTHER HEAT SHOCK PROTEIN 70KDA 1 257 IPR013126 GO:0005524|GO:0140662
Trme22077g00001 303 Gene3D - 231 303 IPR029048 -
Trme22077g00001 303 PRINTS 70kDa heat shock protein signature 25 41 - -
Trme22077g00001 303 PRINTS 70kDa heat shock protein signature 57 77 - -
Trme22077g00001 303 PRINTS 70kDa heat shock protein signature 83 102 - -
Trme22077g00001 303 PRINTS 70kDa heat shock protein signature 163 179 - -
Trme22077g00001 303 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 79 230 IPR029047 -
Trme22077g00001 303 Gene3D - 7 57 - -
Trme22077g00001 303 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 231 295 IPR029048 -
Trme22077g00001 303 Coils Coil 200 220 - -
Trme22077g00001 303 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme22077g00001 Trme-Chr22077 383 1294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme22077g00001 1 302 Calmodulin-binding Proteins AT3G12580 55.921 1.88e-107 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme22077g00001 K03283 - gmx:102667572 375.555