Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme220597g00001 ATGAAGGATGAGGCTGCTGGAGAGGTACCTGTTGCATTTGTCGTGAGATCAAATGGTCACACTGACTTAACCGAGGATGAAATTAAGCAATTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAATCGAGTATTCTTCATTGATGCAATTCCCAAGTCACCGTCAGGCAAAATCTTGCGCAAGGATCTCAGAGCAAAGTTAGCAGCAGAAGCTGTTTCAAATTGA 228 0.4123 MKDEAAGEVPVAFVVRSNGHTDLTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAEAVSN 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme220597g00001 75 SUPERFAMILY Acetyl-CoA synthetase-like 2 71 - -
Trme220597g00001 75 Gene3D - 1 73 IPR045851 -
Trme220597g00001 75 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 66 - -
Trme220597g00001 75 Pfam AMP-binding enzyme C-terminal domain 2 58 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme220597g00001 Trme-Chr220597 164 391 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme220597g00001 3 64 Monolignol Biosynthesis Gene Families AT4G05160 59.677 2.84e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme220597g00001 K01904 - gmx:547944 130.568