Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme220562g00001 GAAAGGACTCTCTTGTCCTGGTTGATCGAGAACGGGGTCATATCTTTAAATGATGTTATTCAATACCGAAATCCTAAAGATAATTCTGTCACTAAGGATGGTAAGATCACCAAAGATGGCATTGTTTGTAAGTGTTGTGGTAAGGTGCTTACATTGTCAGAGTTCAAGACTCATGCTGGGTTTACACTGAGTCGCCCTTGCTTGAATCTTTTCATGAAGTCTGAAATGATGACTCGTGCGGGTTGTGTGGTGAGGGAGGTGAGCTGA 267 0.427 ERTLLSWLIENGVISLNDVIQYRNPKDNSVTKDGKITKDGIVCKCCGKVLTLSEFKTHAGFTLSRPCLNLFMKSEMMTRAGCVVREVS 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme220562g00001 88 PANTHER PHD FINGER FAMILY PROTEIN 1 83 - -
Trme220562g00001 88 Pfam Tify domain binding domain 34 74 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme220562g00001 Trme-Chr220562 3 366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme220562g00001 2 74 PHD Transcription Factor Family AT3G14980 61.644 2.95e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme220562g00001 - - mtr:25487250 144.821