Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme220360g00001 GCCGCAAACGCAACCGCTGTGGCAAACTATCTCTGCACCCAATTTGATGCCATCTCCAAAAAGTTCAGTGATACCACCTATGCAATAGACAACACCTACCTTCTCTTCTCAGCTTACTTAGTCTTCGCTATGCAGCTCGGTTTCGCCATGCTCTGTGCCGGCTCTGTTCGAGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTTGATGCCGCTGCTGGTGGCCTTTCCTATTACCTTTTCGGCTTTGCTTTTGCATTCGGAGCACCCTCTAACGGCTTCATCGGACGTCACTTTTTCGGCCTAAGGGATTACCCTTCACCCGCCGGAGACTACAGCTTCTTCCTCTACCAATGGGCTTTCGCCATCGCCGCTGCAGGCATCACCAGTGGCTCTATTGCAGAGAGA 411 0.5158 AANATAVANYLCTQFDAISKKFSDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPAGDYSFFLYQWAFAIAAAGITSGSIAER 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme220360g00001 137 Gene3D Ammonium transporter AmtB like domains 7 137 IPR029020 -
Trme220360g00001 137 Pfam Ammonium Transporter Family 33 137 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trme220360g00001 137 PANTHER AMMONIUM TRANSPORTER 9 137 - -
Trme220360g00001 137 SUPERFAMILY Ammonium transporter 27 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme220360g00001 Trme-Chr220360 3 413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme220360g00001 3 137 Inorganic Solute Cotransporters AT4G13510 81.481 2.09e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme220360g00001 K03320 K07573 qsu:112038007 230.72