Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21989g00001 ATGAAAAATGCTAAAAACGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGCGATCGCTTCAAAACTTTACTACCTCCAGCAGCTAAAGTTAAATGTGTCTCAGATGCTGGTTATTTTATCAATGTAAAGTCCGTCTCTGGATCACAACACATTGAACAATTCTACAGTCAAGTTGTTCAAACTCATGGCTCAGCAAAGAACTTGCCTTCATCTTGCACTTCAAGACTCCCACCAGGGCTGTGTTTTTTCCCGGAAAACGTGGCCGCACAAATCAGGACTCCAATCTTCTTTGTAAATGCAGCCTATGATTCATGGCAG 336 0.4137 MKNAKNAILSGCSAGGLTSILQCDRFKTLLPPAAKVKCVSDAGYFINVKSVSGSQHIEQFYSQVVQTHGSAKNLPSSCTSRLPPGLCFFPENVAAQIRTPIFFVNAAYDSWQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21989g00001 112 PANTHER NOTUM-RELATED 1 112 IPR004963 GO:0016787
Trme21989g00001 112 Pfam Pectinacetylesterase 1 112 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21989g00001 Trme-Chr21989 331 1268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21989g00001 1 112 Carbohydrate Esterase AT4G19420 65.179 1.22e-51 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21989g00001 K19882 - zju:107430580 197.593