Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme219734g00001 GGATATGTTGTTTACCGTGTTCGTGTCCGTAGAGGTGGCCGAAAGAGGCCAGTGTCCAAGGGTATTGTTTATGGTAAACCAACCAACCAGGGAGTTACCCAACTCAAGTTTCAGAGGAGCAAGAGGTCAGTTGCTGAGGAGCGTGCT 147 0.5034 GYVVYRVRVRRGGRKRPVSKGIVYGKPTNQGVTQLKFQRSKRSVAEERA 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme219734g00001 49 Gene3D Ribosomal protein l15e 1 49 IPR024794 GO:0003735|GO:0005840
Trme219734g00001 49 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 49 IPR012678 GO:0003735|GO:0005840|GO:0006412
Trme219734g00001 49 Pfam Ribosomal L15 1 49 IPR000439 GO:0003735|GO:0005840|GO:0006412
Trme219734g00001 49 PANTHER RIBOSOMAL PROTEIN L15 1 49 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme219734g00001 Trme-Chr219734 267 413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme219734g00001 17 49 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 96.970 3.20e-16 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme219734g00001 K02877 - sspl:121801175 80.4925