Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme219627g00001 GAGTCTACACTTCAGCTGCTAAATTTCGCCGATGCTATAGCCTTAGGAAGCCGATCACCGGAGAGGTTGTTTAGAGTCCTCGATGTGTTTGAAACAATGCGTGACCTAATTCCAGAGTTTGAGTCTATGTTAGGTGGGTTGCTGCAAAACGAAGCAACCACAATTTGGAAGAGATTGGGGGAAGCAATCAGAGGCATTTTCATGGAGTTGGAGAATCGGATCCGCCATGATTCAGGAAGGACGGCCTCTCCCAGTGGCGGGCTTCACGCAATTACCCGTTATGTGATGAACTACCTTTGTATTGCATGCGAGTCATGGCAGACACTGGAGCAAGTGTTTGA 341 0.4809 ESTLQLLNFADAIALGSRSPERLFRVLDVFETMRDLIPEFESMLGGLLQNEATTIWKRLGEAIRGIFMELENRIRHDSGRTASPSGGLHAITRYVMNYLCIACESWQTLEQVF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme219627g00001 113 Pfam Exo70 exocyst complex subunit 3 113 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trme219627g00001 113 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 113 IPR004140 GO:0000145|GO:0006887
Trme219627g00001 113 Gene3D Exocyst complex component Exo70 1 113 - -
Trme219627g00001 113 SUPERFAMILY Cullin repeat-like 2 113 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme219627g00001 Trme-Chr219627 73 413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme219627g00001 2 113 EXO70 exocyst subunit family AT5G58430 75.862 1.01e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme219627g00001 K07195 - ath:AT5G58430 171.4