Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21937g00001 CACAACGTAAAATCTTCGATATCCTTTTATATGGTTCCAAAGATGTGGCAAGTTGTGTATACGGTGAGTATTGGAGACAAGGTGGCTTTTGGAAAAAGATACCGTGAAGGAATTAGAGGGATGAAATTTCAGAAGGTGTTGGAATTTGGGGAGTTATTAGGTACTGTATGTATTGGAGACTATATACCTTGGCTTGATTGGTTCGGGAAAGTTAATGGTTTGTATAGCAGGGCAGAAAAATGTGCCAAATATTTGGATGAGTTTATCGAACAAGTAATTGAGGAGCACATTAGTCATAGGTTGAGGAATGGTAATGTTGATAATGAGGAGCAGAGTGATTTTGTGGATGTTTTGCTTTCTGTTCAAAAGAATAATGCTATTGGCTTTCCAATTGATAGAACTGCAATCAAGGCTTTGATACTGGTGTGTCACGGTGTCCGACACGTGTCAGTGTCCAACACTCGTATGACACTAGACATGTTTGCTGGCGGTACTGATACTACTTACACAGTCCTAGAATGGGCGATGGCAGAACTGTTTAGACACGAAACTGTGATGCGTAAATTGCAAGATGAAGTCAGAACTGTGGTTGGCAACAGAACTCATGTAACTGAAGAGGATTTGGTTCACACGAGCTACTTGAAAGCTGTGATTAAAGAAACCCTTCGCCTCCACGTACCAATAACGTTATTGGTCCCTCGGAAATCAATGGAAGATGTCAAACTAAATGGCTATGACATTCCAGCTGGAACACAG 756 0.4101 HNVKSSISFYMVPKMWQVVYTVSIGDKVAFGKRYREGIRGMKFQKVLEFGELLGTVCIGDYIPWLDWFGKVNGLYSRAEKCAKYLDEFIEQVIEEHISHRLRNGNVDNEEQSDFVDVLLSVQKNNAIGFPIDRTAIKALILVCHGVRHVSVSNTRMTLDMFAGGTDTTYTVLEWAMAELFRHETVMRKLQDEVRTVVGNRTHVTEEDLVHTSYLKAVIKETLRLHVPITLLVPRKSMEDVKLNGYDIPAGTQ 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21937g00001 252 PANTHER CYTOCHROME P450 71B11-RELATED 19 252 - -
Trme21937g00001 252 SUPERFAMILY Cytochrome P450 15 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme21937g00001 252 Gene3D Cytochrome P450 8 252 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme21937g00001 252 PRINTS E-class P450 group I signature 152 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme21937g00001 252 PRINTS E-class P450 group I signature 172 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme21937g00001 252 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme21937g00001 252 PRINTS P450 superfamily signature 163 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme21937g00001 252 PRINTS P450 superfamily signature 216 227 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme21937g00001 252 Pfam Cytochrome P450 18 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21937g00001 Trme-Chr21937 187 1320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21937g00001 2 252 Cytochrome P450 AT3G48270 40.079 1.20e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21937g00001 - - tpra:123915719 290.812