Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21924g00001 ATGGAGCATTCTCTTCCCATAAGGACTAGATTGCTCAAGGTCCTGCTGTCATATATGGAGGCAACTGTTCTCTCTGAAGCATTTGGAACAATTTGGACAACTGATTTTAGGAAGCGTTGGGGTGTGAAGCTGAGTAAATCGTCATCTGTTGAGGAACTTCTACAGATGTTGACCCTATTTGAAAAAGCACTACGGCGAGATTTTCTGTCATCAGATTTCTCTACAACAGACGAATTGTTGGGATTAAGCAGTAAGTCAAAAAGTGCTGCGAATGTGTCTGCTGATCCTGAATCAGTTGCTCTACTTCCATGGATTCCACAAACCACTGCAGCATTGTCTCTCAGGCTTTTTGAGTTCGATTCATCCATCAGCTATGTAAAGCTCGAGAGACTTGAGCCTGTTGAGGAAAAAGAAGCAAGAGAATACATTACGCTTCCATCAAGATATACTCCCTTCAAGCCTAATAGGGAGGTTGAGCCAGCAGCTCTTGATCATGATGGATTCACCAAAGTTAAATCCTCTGCTAAAATTGTGCGAAGCAATAAACGTGGACGGGGGGCTAGTGATCATGGGCGGG 577 0.4385 MEHSLPIRTRLLKVLLSYMEATVLSEAFGTIWTTDFRKRWGVKLSKSSSVEELLQMLTLFEKALRRDFLSSDFSTTDELLGLSSKSKSAANVSADPESVALLPWIPQTTAALSLRLFEFDSSISYVKLERLEPVEEKEAREYITLPSRYTPFKPNREVEPAALDHDGFTKVKSSAKIVRSNKRGRGASDHGR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21924g00001 192 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 2 188 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21924g00001 Trme-Chr21924 106 1042 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21924g00001 6 145 Homeobox Transcription Factor Family AT5G44180 47.143 1.02e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21924g00001 - - psat:127081735 310.842