Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme218790g00001 ATGATGATCAACGAGGAGCTTCATGCAAGTTGGGACCAGCCAACTGGGTGCATTGTTTTCCAAAATGTTGAGCACTCTAGGCTGCAAGCATTGGCATTCCAATTGACAGAGAAATTATCTATCCTTGCAGAGAGTAATGAAAGAGCCATGGAGGCAAGAATAGGTGGTGGATTGGATCTGCCTCCAAGACGAAGGGATGGACAGGACTATGCTGCTGCTGCTGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNGGTGGTAGGTGGCAGGACTTGTCCTATTCTCAGCCACGGCAAGGGAGTGGACGTGCAGGATATGGTAATGCTGGTGGAAGGCCATTGGCATATGGCCAAGCAGCTAGGAGTGGCTATTCAAGGGATCGAGTGGGGCGTGCTGGTTATCAGAGTTCAGGG 414 0.471 MMINEELHASWDQPTGCIVFQNVEHSRLQALAFQLTEKLSILAESNERAMEARIGGGLDLPPRRRDGQDYAAAAXXXXXXXXXXXGGRWQDLSYSQPRQGSGRAGYGNAGGRPLAYGQAARSGYSRDRVGRAGYQSSG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme218790g00001 138 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 105 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Trme218790g00001 138 MobiDBLite consensus disorder prediction 85 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme218790g00001 Trme-Chr218790 2 415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme218790g00001 1 101 Eukaryotic Initiation Factors Gene Family AT3G56150 68.269 2.07e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme218790g00001 K03252 - ccaj:109797232 195.667