Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21860g00001 GCTTTTGACACGGAGCAACTGTTAGAGTGTATGAAGAAGCTCATCAGTGGCCAAAGAGTCAAAATTCCCATTTATGACTTTAAGAAGCACCAACGCTCTTCTGATAGTTTCCGTCAGGTCAATGCCTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCACGATCAAGGTGTCCGTGATCTGATGAACATGAAGATCTTTGTTGACACAG 214 0.4206 AFDTEQLLECMKKLISGQRVKIPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQGVRDLMNMKIFVDT 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21860g00001 71 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 71 IPR027417 -
Trme21860g00001 71 Gene3D - 1 71 IPR027417 -
Trme21860g00001 71 PANTHER URIDINE KINASE 1 71 - -
Trme21860g00001 71 Pfam Phosphoribulokinase / Uridine kinase family 1 71 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21860g00001 Trme-Chr21860 540 1227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21860g00001 1 71 PRT Gene Family AT5G40870 78.873 1.55e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21860g00001 K00876 - gmx:100786137 130.183