Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21826g00001 ATGGCACCAGAGGTGATACGATGTGAGCCTTACAATGAAAAATGTGATGTATACAGTTTTGGAGTCATATTGAACGAGCTTCTCACAGGAAAACACCCCTACATTGAGACAGAATATGGTCCTGCCAAGATTGCTATGGAGGTTGTAGAGGGCAAGCTGCGGCCTATGCTTCCTTCACGGGACGATG 187 0.4652 MAPEVIRCEPYNEKCDVYSFGVILNELLTGKHPYIETEYGPAKIAMEVVEGKLRPMLPSRDD 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21826g00001 62 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 59 - -
Trme21826g00001 62 Pfam Protein kinase domain 1 36 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21826g00001 62 SUPERFAMILY Protein kinase-like (PK-like) 1 59 IPR011009 -
Trme21826g00001 62 ProSiteProfiles Protein kinase domain profile. 1 62 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21826g00001 62 Gene3D Transferase(Phosphotransferase) domain 1 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21826g00001 Trme-Chr21826 466 786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21826g00001 1 57 PP2C-type Phosphatase Gene Family AT2G40860 40.580 8.14e-13 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Trme21826g00001 Pkinase 3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21826g00001 - - ahf:112757851 125.946