Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21812g00001 AAACTCCGAGACGGGCGTTTGGTTGCGGTGAAACGCATGAACGAAAACAACTATAGGAGAGTTGAGCAATTTGTAAATGAAGTTGAGATCTTAACAGGMTTACACCATCAAAATCTTGTGTCACTATACGGATGCACTTCGCGCCACAGTCGYGAACTTCTGCTAGTATATGAATATGTTCCTAATGGAACTGTTGCTGATCACCTTCATGGTAAAAAAGCAAAACCTGGCATGTTACCTTGGCATATCAGAATGAACATTGCAATAGAAACTGCTAGTGCATTGGTATATCTTCACGCCACCGACATCATCCATAGAGATGTGAAAACAACCAACATTCTACTTGACAATCATTTTAGTGTCAAAGTAGGAGATTTTGGACTTTCGCGTCTATTTCCAATCCATGTCACACACATTTCAACTGCTCCACAAGGGACTCCAGGTTACGTGGATCCGGAATACCATTTGTACTATCAACTAACTGATAAAAGCGATGTATTTAGCTTCGGAGTTGTGTTGATTGAGTTGATATCATCTATGCCTGCTGTCGATATCTTGAGGAAAAGACAAGATATCAATTTGTCTAACATGGCTATTAAGAAGATTCAAAATGGAACATTGCATGAGCTTGTTGATCCTACACTTGGTTTTGAATCAGATTTCAAGATAAGGAAAATGATCAATGCTGTGGCAGAGTTAGCATTTCAGTGTTTGCAGAATTCTAAAGATGTTAGACCTTCTATGGTTGAAGTGTTGGAAAGGCTTAAGGATATTCAGAGTGATGGAACATATAAATGTAAACCTGAGGTGTTGGATATTTCAGTAGATGATGATATTACTTTGATGAAAAATGAACCACCACCATCATCACCAGATTCAAATATCATTATTAATTTCCCCTGA 903 0.3821 KLRDGRLVAVKRMNENNYRRVEQFVNEVEILTGLHHQNLVSLYGCTSRHSRELLLVYEYVPNGTVADHLHGKKAKPGMLPWHIRMNIAIETASALVYLHATDIIHRDVKTTNILLDNHFSVKVGDFGLSRLFPIHVTHISTAPQGTPGYVDPEYHLYYQLTDKSDVFSFGVVLIELISSMPAVDILRKRQDINLSNMAIKKIQNGTLHELVDPTLGFESDFKIRKMINAVAELAFQCLQNSKDVRPSMVEVLERLKDIQSDGTYKCKPEVLDISVDDDITLMKNEPPPSSPDSNIIINFP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21812g00001 300 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21812g00001 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672|GO:0006468
Trme21812g00001 300 Gene3D Transferase(Phosphotransferase) domain 1 61 268 - -
Trme21812g00001 300 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 294 IPR044652 GO:0004672
Trme21812g00001 300 FunFam Wall-associated receptor kinase-like 20 60 267 - -
Trme21812g00001 300 Pfam Protein kinase domain 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21812g00001 300 PIRSF ILK 3 269 - -
Trme21812g00001 300 SMART serkin_6 1 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21812g00001 300 Gene3D Phosphorylase Kinase; domain 1 1 60 - -
Trme21812g00001 300 SUPERFAMILY Protein kinase-like (PK-like) 3 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21812g00001 Trme-Chr21812 164 1066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21812g00001 1 293 Receptor kinase-like Gene Family AT1G25390 64.238 7.44e-129 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trme21812g00001 Pkinase 2.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21812g00001 - - vra:106766190 486.493