Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2180g00001 ATGAGTGATGACTTAAATTGCAAGACATTGATATTGCAGCCACAAGTGAAAGTAGCTCAGATAAATGGAAATGAGTATTTTCTGAAGGTGTTATGTGAGCATAGGACTGGTGGTTTTGTGAAATTGATGGAAGCTTTGAACACTCTAGGCATGGATGTGGTACATGCCACAGTTACTAGCCACAAGGGTGTTGTCTCAAAGTGGAG 206 0.4078 MSDDLNCKTLILQPQVKVAQINGNEYFLKVLCEHRTGGFVKLMEALNTLGMDVVHATVTSHKGVVSKW 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2180g00001 68 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 13 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2180g00001 Trme-Chr2180 58 263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2180g00001 3 66 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 46.875 1.52e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2180g00001 - - psat:127097943 98.9821