Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme217950g00001 AATGTTGAAGATATCATGGATGTGGTGATTCCTAGAAACACTTCTGTACCTGTCAAGAAGACCAAACAATATTCTACCGCTAAAGATGGTTGCAATGTCTCGATTGAGGTTTATGAAGGTGAGAGAGCCAGAGCCACAGACAACAATCTGCTTGGTTCGTTCGTCCTTTCTTGCCTTCCAGGTGCTCCTCGAGGCCAGCCCTTAGAAGTTTGCTTTACCATCGATGAAAATGGTACCCTAACAGTTTCTGCTAAGGAAATATCTACAGGAAATATGAACGAGATTACCATAACCAATGACAAAGAAAGGTTGTCAACATTTGAAATTAAAAAGATGATCGAAGAAGCTGAG 351 0.4103 NVEDIMDVVIPRNTSVPVKKTKQYSTAKDGCNVSIEVYEGERARATDNNLLGSFVLSCLPGAPRGQPLEVCFTIDENGTLTVSAKEISTGNMNEITITNDKERLSTFEIKKMIEEAE 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme217950g00001 117 PANTHER HEAT SHOCK PROTEIN 70KDA 3 117 IPR013126 GO:0005524|GO:0140662
Trme217950g00001 117 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 117 IPR029047 -
Trme217950g00001 117 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 3 117 IPR029047 -
Trme217950g00001 117 Pfam Hsp70 protein 4 117 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme217950g00001 Trme-Chr217950 66 416 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme217950g00001 5 117 Calmodulin-binding Proteins AT3G12580 60.000 2.10e-37 131