Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21762g00001 GATGGTGGTTTTAGTTTGAAATTTGGTCCTAAAACCTTGATGATTTGTGCACAATGCGAAAAAGAATATCATGTCAGCTGTCTGAGGAGACATTCTATAGAGAACTTAGAGGAACTCCCTAGGGGCAACTGGTTTTGCTCACCTAGTTGCAGTGAAATTCATTCAGCAATGATGCATTTGGTTGCTTTTGGGGACAATAATGTCCCCGGCCGTAAGGACATTAAATGGAGAGTCCTTAACAACAAACTAACTTTGGGGAATGACAAACCATTATTGGCAAAGGCGCATGTAATCTTTGGTGAAAGGTTTCGACCGATGTTTGTGTCTGAGGGCGTTGATGTTATCAAAGGAATGATCTATGGGTAA 366 0.4126 DGGFSLKFGPKTLMICAQCEKEYHVSCLRRHSIENLEELPRGNWFCSPSCSEIHSAMMHLVAFGDNNVPGRKDIKWRVLNNKLTLGNDKPLLAKAHVIFGERFRPMFVSEGVDVIKGMIYG 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21762g00001 121 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 53 IPR013083 -
Trme21762g00001 121 PANTHER AUTOIMMUNE REGULATOR 7 121 - -
Trme21762g00001 121 SUPERFAMILY FYVE/PHD zinc finger 10 48 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21762g00001 Trme-Chr21762 720 1248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21762g00001 8 121 PHD Transcription Factor Family AT2G36720 36.567 3.07e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21762g00001 - - pcin:129313514 129.798