Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme217315g00001 GGTCAGGTCACCCAGGTGAGAGTAAAGTTTTTGGACGATCAGAATCGTCACATCATGCGCAATGTCAAGGGACCTGTTAGGGAGGGTGATGTTCTAACCCTCCTTGAGTCTGAGAGGGAAGCAAGAAGACTCCGATAG 138 0.5 GQVTQVRVKFLDDQNRHIMRNVKGPVREGDVLTLLESEREARRLR 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme217315g00001 45 SUPERFAMILY Nucleic acid-binding proteins 1 45 IPR012340 -
Trme217315g00001 45 ProSitePatterns Ribosomal protein S28e signature. 36 44 IPR028626 -
Trme217315g00001 45 Gene3D - 1 45 IPR012340 -
Trme217315g00001 45 PANTHER 40S RIBOSOMAL PROTEIN S28 1 45 IPR000289 GO:0003735|GO:0005840|GO:0006412
Trme217315g00001 45 Pfam Ribosomal protein S28e 1 44 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme217315g00001 1 45 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 86.667 1.11e-21 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme217315g00001 K02979 - gmx:100811085 66.2402