Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21706g00001 ATGGGGGTGGATTATTATGAAGTACTAAATGTAGGGAGGAATGCAACAGATGATGATCCGAAGAAAGCTTACCGGAAATTGACAATGAGATGGCATCCTGATGAGAATCCTACCGACAAGAAAGAAGCTGAAGCCAAATTCAAGAAGATCTCCGAAGCTTATGAAGTCCTCAGTGACCCACATAAGAGAACAACATACGATCAGCATGGTGAAGAAGGTCTAAAAGATATGCCAGCTCCCGGCACTAGTGGCAATGGTGGATTCCCAAATGGATTTAATCC 281 0.4342 MGVDYYEVLNVGRNATDDDPKKAYRKLTMRWHPDENPTDKKEAEAKFKKISEAYEVLSDPHKRTTYDQHGEEGLKDMPAPGTSGNGGFPNGFNP 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21706g00001 94 MobiDBLite consensus disorder prediction 59 74 - -
Trme21706g00001 94 PRINTS DnaJ domain signature 42 62 IPR001623 -
Trme21706g00001 94 PRINTS DnaJ domain signature 6 24 IPR001623 -
Trme21706g00001 94 PRINTS DnaJ domain signature 24 39 IPR001623 -
Trme21706g00001 94 PRINTS DnaJ domain signature 62 81 IPR001623 -
Trme21706g00001 94 MobiDBLite consensus disorder prediction 59 94 - -
Trme21706g00001 94 CDD DnaJ 4 59 IPR001623 -
Trme21706g00001 94 Gene3D DnaJ domain 3 93 IPR036869 -
Trme21706g00001 94 PANTHER DNAJ HOMOLOG SUBFAMILY B 3 89 - -
Trme21706g00001 94 SUPERFAMILY Chaperone J-domain 3 84 IPR036869 -
Trme21706g00001 94 SMART dnaj_3 3 62 IPR001623 -
Trme21706g00001 94 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Trme21706g00001 94 Pfam DnaJ domain 4 67 IPR001623 -
Trme21706g00001 94 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21706g00001 Trme-Chr21706 601 1325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21706g00001 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 6.41e-12 58.2