Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21671g00001 ATAGTAAATTGGAGAACTACTTTGAAATTTCCGGAAGAAGCTAAACTTTCACCAGAGGCAAAGGATCTTATTTGCAGACTCCTATGTAATGTGGAGCAGAGGCTTGGAACCAAAGGAGCTGATGAAATAAAGGCTCATGCATGGTTTGAAGGTACTGAGTGGGACAAATTGTACCAAATGAAAGCTGCTTTTATGCCTGAGGTCAATGACGAATTAGATACTCAAAATTTTGAGAAATTTGAAGAGGCGGACAAGCAAACTGAACCTTCCTCAAAGGCAGGACCATGGAGAAAGATGCTTCCATCTAAAGATATTAACTTTGTTGGTTACACATACAAGAATTATGAAATTGTGGATGAAAATGTAATACCTGGAATTGGTAAGTTCATCTTTCTCTCTAATATAAATGTGTCTGTATGCCACTCTCTCTTTGTGCGCGTGTGTCTATAA 450 0.3822 IVNWRTTLKFPEEAKLSPEAKDLICRLLCNVEQRLGTKGADEIKAHAWFEGTEWDKLYQMKAAFMPEVNDELDTQNFEKFEEADKQTEPSSKAGPWRKMLPSKDINFVGYTYKNYEIVDENVIPGIGKFIFLSNINVSVCHSLFVRVCL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21671g00001 149 Pfam Protein kinase C terminal domain 68 112 IPR017892 GO:0004674|GO:0005524|GO:0006468
Trme21671g00001 149 ProSiteProfiles AGC-kinase C-terminal domain profile. 50 122 IPR000961 GO:0004674|GO:0005524|GO:0006468
Trme21671g00001 149 SUPERFAMILY Protein kinase-like (PK-like) 5 97 IPR011009 -
Trme21671g00001 149 Gene3D Transferase(Phosphotransferase) domain 1 1 69 - -
Trme21671g00001 149 FunFam Non-specific serine/threonine protein kinase 68 78 - -
Trme21671g00001 149 PANTHER MYOTONIC DYSTROPHY S/T KINASE-RELATED 1 92 - -
Trme21671g00001 149 SMART pkinase_C_6 50 114 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21671g00001 Trme-Chr21671 190 1311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21671g00001 1 134 AGC Kinase Gene Family AT4G14350 78.358 8.46e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21671g00001 K08790 - gmx:100795087 243.817