Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21643g00001 GTGGCAACTTTTATAGCAGTATATGCTAATTGGAGCTTCGCGAGAATTAAGGGAATGGGATGGGGTTGGGCTGGTGTAATATGGGTGTACAGTATAGTGACATATATCCCTCTTGATATACTCAAATTCGTAATCCGCTATGTTCTAAGTGGCAAAGCTTGGGATAATCTTTTGGAGAACAAGACTGCCTTCACAACGAAGAAAGACTATGGCAAAGAAGAGAGAGAAGCACAGTGGGCCACTGCTCAGAGAACTCTTCATGGTCTTCAGTCACCTGACACAACCAACCTTTTCAATGACAAGAATAGCTACAGGGAGCTTTCTGAGATTGCTGAGCAAGCGAAGAGACGCGCTGAAGTTGCACGGCTTAGGGAGCTTCATACTCTAAAGGGTCACGTTGAATCAGTCGTGAAGCTTAAGGGACTTGACATTGACACTATGCAACAACATTATACTGTTTAA 462 0.4372 VATFIAVYANWSFARIKGMGWGWAGVIWVYSIVTYIPLDILKFVIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQSPDTTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTMQQHYTV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21643g00001 153 Coils Coil 104 124 - -
Trme21643g00001 153 Gene3D - 102 153 - -
Trme21643g00001 153 Gene3D - 1 48 - -
Trme21643g00001 153 PANTHER CALCIUM-TRANSPORTING ATPASE 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21643g00001 Trme-Chr21643 185 880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21643g00001 1 153 Primary Pumps ATPases AT2G24520 85.621 1.24e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21643g00001 K01535 - gmx:547525 301.212