Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21607g00001 CTTTCACCCGGAAAAAACCGACTGGATTGGAATACAAGAATGAAAATAGCTGCTGGTGCAGCTAGAGGTTTGGAGTATTTGCATACCAAAATGAAGCCACCTGTCATATACCGCGACCTCAAATGCTCCAACATTTTGTTAGGCGACGATTATCATCCCAAGTTATCTGATTTTGGCTTGGCGAAAGTAGGTCCAATTGGTGATAAGACTCATGTTTCGACAAGAGTTATGGGCACATATGGGTACTGTGCTCCAGATTACGCAATGACGGGTCAATTGACATTCAANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNATCACAGGCAGGAAGGCCATCGATCATAGGAAACCTCATAAAGAACAAAATCTTGTCGCATGGTTTGATGATGATGATGATNNNNNTGATGATGATGATGATGATGAAAAAGCGAAGCATGCAAGGCCTTTATTCAGAGACCGAAGAAGATTCTCAGAGATGGTTGATCCATTGCTTGAAGGTCAATATCCAGTAAGAGGTTTGTACCAATCTCTTGCTATTGCTGCTATGTGTGTGCAAGAACAGCCTAATATGCGGCCGGTTATATCCGATGTGGTCAC 608 0.3964 LSPGKNRLDWNTRMKIAAGAARGLEYLHTKMKPPVIYRDLKCSNILLGDDYHPKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFXXXXXXXXXXXXXXITGRKAIDHRKPHKEQNLVAWFDDDDDXXDDDDDDEKAKHARPLFRDRRRFSEMVDPLLEGQYPVRGLYQSLAIAAMCVQEQPNMRPVISDVVT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21607g00001 203 SUPERFAMILY Protein kinase-like (PK-like) 6 95 IPR011009 -
Trme21607g00001 203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 35 47 IPR008271 GO:0004672|GO:0006468
Trme21607g00001 203 PANTHER OS07G0668900 PROTEIN 2 203 - -
Trme21607g00001 203 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21607g00001 203 Gene3D Transferase(Phosphotransferase) domain 1 1 203 - -
Trme21607g00001 203 FunFam Serine/threonine-protein kinase PBS1 1 203 - -
Trme21607g00001 203 Pfam Protein kinase domain 13 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21607g00001 Trme-Chr21607 324 1327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21607g00001 1 203 Glycoside Hydrolase AT3G07070 52.709 4.51e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Trme21607g00001 Pkinase 7.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21607g00001 - - bhj:120083806 306.219