Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme215861g00001 CTATTGTCAGGTGGGACATTTGCTCTCTATTCACTGCTCTGTAGGCATGCCAAATTTAATTTGCTTCCAAATCAACAAGCAGCCGATGAGGAGCTGTCGTCATACAAATACGGTCCGTCGTCACAGACTGGAGCCTCATCTCCGTTGAAGTTGTTTTTGGAGAAGCACCGACGGTTAAGAACAGTCCTTCTTGTTGTCGTGCTATTTGGTGCTTGCATGGTCATAGGTGATGGTGTACTTTCTCCAGCTATTTCAGGTAAGGTAGTCTTGTGA 273 0.4579 LLSGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQTGASSPLKLFLEKHRRLRTVLLVVVLFGACMVIGDGVLSPAISGKVVL 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme215861g00001 90 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 4 85 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trme215861g00001 90 Pfam K+ potassium transporter 4 85 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme215861g00001 Trme-Chr215861 1 273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme215861g00001 4 83 Inorganic Solute Cotransporters AT3G02050 80.000 3.42e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme215861g00001 K03549 - gmx:100790329 149.058