Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21525g00001 ATGAATGCTCGGCAAAGTTTGAAGACTTTGGATTTGAGCTACCTCGAGACTTCAACATCCGAGTTTGAGGTTTCACATGGAATGGAAAATTGCATAGACCAATGGGGAAAGCATTTGGAGTTGGTTGTTAAGAAACTTCTTGAGGTTGAATACAAGCTAAGTACTATTGTGTTTGAGAAAATTGGTTCAAAAGCATGGATAAGTTGTTTTGCAAAGATTGCTATTGAATCAAGAATCTTTTCATTTATCAAATTTGGAAAGGTTGTTACAGAGAGGAAAAATGATCCTTTCAAGCTATTGAATTTGTTGTCAATGTTTAGTGTTTTGAATGGTTTAAGACTAAAATTTAATCAACTTTTTAGAGGGGAAGCTTGTGAAGAAATTAGAATTGTTACAAAGGATCTTATCACAAGAGTTGTTAATGGTGCTAGTGAGATATTCTTACAACTTTCAGAACAAGTGAAGTTGCAAAGACCAACTTGTCCTCCCTCAGATGGTACTGTTCCTAAGCTG 513 0.3509 MNARQSLKTLDLSYLETSTSEFEVSHGMENCIDQWGKHLELVVKKLLEVEYKLSTIVFEKIGSKAWISCFAKIAIESRIFSFIKFGKVVTERKNDPFKLLNLLSMFSVLNGLRLKFNQLFRGEACEEIRIVTKDLITRVVNGASEIFLQLSEQVKLQRPTCPPSDGTVPKL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21525g00001 171 Gene3D Exocyst complex component Exo70 2 171 - -
Trme21525g00001 171 SUPERFAMILY Cullin repeat-like 5 170 IPR016159 -
Trme21525g00001 171 PANTHER EXOCYST COMPLEX PROTEIN EXO70 18 171 IPR004140 GO:0000145|GO:0006887
Trme21525g00001 171 Pfam Exo70 exocyst complex subunit 34 171 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21525g00001 1 171 EXO70 exocyst subunit family AT4G31540 52.047 4.64e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21525g00001 K07195 - mtr:25486509 275.789