Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21479g00001 ATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCACTATTTCAAGGTGCAGAAGTCAAAGCTACACCAAATCCTTTTCAGCTTGATCAGCTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCACATCTTCCCCATTGGCAACAAGATTCGCAACATATACAAGGACACAAATATGACAATGCCAATCTCTATAGTGTTGTACACCTATCTCCAAAAAGTCCCGCATATGACCTATTGTCAAAGATGCTTGA 290 0.4172 MWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLAHLPHWQQDSQHIQGHKYDNANLYSVVHLSPKSPAYDLLSKML 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21479g00001 96 SUPERFAMILY Protein kinase-like (PK-like) 1 96 IPR011009 -
Trme21479g00001 96 PANTHER CELL DIVISION PROTEIN KINASE 1 96 - -
Trme21479g00001 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21479g00001 1 96 Core Cell Cycle Gene Families AT5G63610 79.167 2.29e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Trme21479g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21479g00001 K02208 - gmx:100813433 193.356