Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21451g00001 ATGAGCTTGATTGATCACCCAAATCTTTTACGGGCACATTGCTCTTTTACCGCTGGACACAGTCTTTGGGTTGTGATGCCATACATGTCCGGGGGCTCTTGCCTTCATATAATGAAATCTTCCTTTCCTGAGGGTTTTGATGAACCTGTTATTGCAACTGTATTGCGCGAGGTTCTCAAAGCTCTTGTTTATCTCCATGCCCATGGGCACATACATAGAGATGTTAAGGCTGGGAATATTTTGCTTGATTCTAATGGTGACGTCAAAATGGCTGACTTTGGAGTGTCTGCGTGTATGTTTGATACTGGAGACAGGCAACGTTCAAGAAATACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTGCATGGATATGATTTTAA 398 0.4296 MSLIDHPNLLRAHCSFTAGHSLWVVMPYMSGGSCLHIMKSSFPEGFDEPVIATVLREVLKALVYLHAHGHIHRDVKAGNILLDSNGDVKMADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21451g00001 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21451g00001 132 Gene3D Transferase(Phosphotransferase) domain 1 32 132 - -
Trme21451g00001 132 Pfam Protein kinase domain 3 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21451g00001 132 SMART serkin_6 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme21451g00001 132 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 132 IPR047173 GO:0043539
Trme21451g00001 132 SUPERFAMILY Protein kinase-like (PK-like) 1 131 IPR011009 -
Trme21451g00001 132 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21451g00001 Trme-Chr21451 31 810 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21451g00001 1 132 MAP Kinase Kinase Kinase Kinase AT5G14720 89.394 7.04e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Trme21451g00001 Pkinase 3.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21451g00001 K08835 - csv:101205102 267.314