Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21427g00001 GATTTACCTAGACTATTTGTACGGCCAAACAAAATTGTTTTGGATTTCCAAAAGGGAAAAGCTGTTGGTCCCGTTACAGTTGGTCCTGTTGCTGATGATGTTAAATCTGGAGAAATGCAAGAAGGAAACATGGATTCTGTTGGTGAATTATCAGTCACTCTTGTGGATGCCCGAAAGCTTCCTTATATTTTTGGCAAGACAGATCCTTATGTTGTTCTTAGCCTTGGAGACCAAACCATACGCAGCAAAAAGAACAGTCAAACTACTGTTATTGGAGCCCCTGGAATGCCAATTTGGAATCAGGATTTCCATATGCTTGTTTCCAACCCTAAAAAGCAGAAGTTAAGTATCCAAGTAAAAGACGCTCTGGGATTTGCAGATTTGCCTATCGGTAAAGGAGAGTCTACTGTGCTTAGATAA 420 0.4048 DLPRLFVRPNKIVLDFQKGKAVGPVTVGPVADDVKSGEMQEGNMDSVGELSVTLVDARKLPYIFGKTDPYVVLSLGDQTIRSKKNSQTTVIGAPGMPIWNQDFHMLVSNPKKQKLSIQVKDALGFADLPIGKGESTVLR 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21427g00001 139 ProSiteProfiles C2 domain profile. 29 139 IPR000008 -
Trme21427g00001 139 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 48 132 IPR035892 -
Trme21427g00001 139 Gene3D C2 domain 27 137 IPR035892 -
Trme21427g00001 139 Pfam C2 domain 48 131 IPR000008 -
Trme21427g00001 139 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 134 - -
Trme21427g00001 139 SMART C2_3c 49 137 IPR000008 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21427g00001 39 130 C2H2 Transcription Factor Family AT4G05330 33.000 9.27e-06 42.0