Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21396g00001 GTGGTAAAAGAGGTATTAAGGATGGCATTTGTAGTGCAATGGTTGCCTAGAGTAGCATTTGAGGACTGTGAAATTGAAGCCGCCCCACCTCTAACAGTTAAGCTTGTCCGAGCTTTCCACACTGATGTCTTGAGTGTTTTCCTAGATAATGTGGATGTGGGAACATTTGTGTTTGTTTTTGAGATNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNGGAGGCCAAATTCATGTGCCAATATATGTCACCGGCATTGTTAAAGTTAGCAACGCAGAAATTGCAGTTCTTGACAATGATCTTGGAAGTGGTGAAACCCAGAAAACGTAG 336 0.372 VVKEVLRMAFVVQWLPRVAFEDCEIEAAPPLTVKLVRAFHTDVLSVFLDNVDVGTFVFVFEXXXXXXXXXXXXXXGGQIHVPIYVTGIVKVSNAEIAVLDNDLGSGETQKT 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21396g00001 111 Pfam Oligosaccharyltransferase subunit Ribophorin II 45 110 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21396g00001 Trme-Chr21396 386 1182 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21396g00001 1 49 Cytochrome P450 AT1G19630 42.857 7.96e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21396g00001 K12667 - gmx:100806815 103.219