Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21386g00001 CGATCTGGTCTTTCATCTGGTATTAGGGGTTATGATGCCACCTACCGCAATCCTGCTGTGTTCCAAAAGTACTCCTATGGAAATTACTCAAATGCATCATTGCAGAATCCAATGGCACCCACATGCAGAGCTACTGTTGATTTATCTGCAGTTGCAACAACCGNTTCACCTGTCTTTGTTGCTGCTCCAGCTGAGAAGAGCCACTTTCTTATCGACTTTCTCATGGGTGGTGTTTCTGCTGCTGTTTCCAAAACTGCTGCTGCTCCCATTGAACGTGTTAAGCTTTTGATCCAAAACCAGGACGAGATGATCAAAACTGGTAGGCTTTCTGAGCCCTACAAGGGTATTGGTGATTGTTTCAAAAGAACAATGGCTGATGAGGGTGTGGTTGCTCTTTGGAGAGGAAACACTGCTAATGTCATCCGTTATTTCCCCACTCAGGCTTTGAACTTTGCATTCAAAGATTACTTCAAGAGGCTTTTCAACTACAAGAAGGACAGAGATGGTTACTGGAAATGGTTTGCTGGCAACTTGGCATCTGGAGGTGCTGCCGGTGCTTCATCCCTCTTGTTTGTTTACTCTCTTGATTATGCCCGTACTCGTCTTGCCAATGATGCTAAGGCAGCTAAGAAAGGAGGAGAAAGGCAATTCAATGGTCTTGTTGATGTCTACAAGAAGACTTTGGCAACTGATGGAGTTGCTGGGCTTTACCGTGGTTTCAACATCTCCTGTGTTGGAATCATTGATAGCTTTTTCGCCAGCTTTGGGCTTGGATGGCTCATCACCAATGGTGCTGGTCTAGCATCATACCCAATTGACACTGTCAGGAGAAGAATGATGATGACATCTGGAGAAGCTGTCAAGTACAAGAGCTCCTTGGATGCATTCAAACAAATCCTCAAGAATGAGGGTGCCAAGTCATTGTTTAAGGGAGCTGGTGCTAACATTCTCCGTGCTGTTGCTGGTGCTGGTGTGCTCGCTGGTTATGACAAGTTGCAGGTTATTGTGTTCGGCAAGAAATATGGATCTGGTGGTGCTTAA 1041 0.4544 RSGLSSGIRGYDATYRNPAVFQKYSYGNYSNASLQNPMAPTCRATVDLSAVATTXSPVFVAAPAEKSHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKTGRLSEPYKGIGDCFKRTMADEGVVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNYKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21386g00001 346 Pfam Mitochondrial carrier protein 171 256 IPR018108 -
Trme21386g00001 346 Pfam Mitochondrial carrier protein 250 335 IPR018108 -
Trme21386g00001 346 Pfam Mitochondrial carrier protein 67 164 IPR018108 -
Trme21386g00001 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 335 IPR018108 -
Trme21386g00001 346 PRINTS Adenine nucleotide translocator signature 254 270 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme21386g00001 346 PRINTS Adenine nucleotide translocator signature 146 158 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme21386g00001 346 PRINTS Adenine nucleotide translocator signature 172 185 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme21386g00001 346 PRINTS Adenine nucleotide translocator signature 113 134 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme21386g00001 346 PRINTS Adenine nucleotide translocator signature 69 81 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme21386g00001 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 160 IPR018108 -
Trme21386g00001 346 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 62 248 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme21386g00001 346 SUPERFAMILY Mitochondrial carrier 67 331 IPR023395 -
Trme21386g00001 346 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Trme21386g00001 346 PRINTS Mitochondrial carrier protein signature 135 155 IPR002067 GO:0055085
Trme21386g00001 346 PRINTS Mitochondrial carrier protein signature 237 255 IPR002067 GO:0055085
Trme21386g00001 346 PRINTS Mitochondrial carrier protein signature 72 85 IPR002067 GO:0055085
Trme21386g00001 346 PRINTS Mitochondrial carrier protein signature 85 99 IPR002067 GO:0055085
Trme21386g00001 346 Gene3D Mitochondrial carrier domain 62 342 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21386g00001 Trme-Chr21386 3 1332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21386g00001 2 346 Antiporters AT5G13490 76.613 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21386g00001 K05863 - gmx:100789942 607.446