Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21369g00001 ATGGTTGCTCATCAGAATAAGTTTGGAAAAGAGTCAGAAAAAATAAAAGCATGGATAGCAGCATTGTCTGAAGTGGCAGACTTGAAAGGTCACCCCATCCACACTGGGCACGAAAACCATCATGTTAAAGAGATTGCTGAAAAGGTCCATGCTAATATAGCTCCAAAACCTTTACTTGTTGGTGAGAATCCAGTTGGACTTGATCAACACATAGAAGAGGTGAAGTCACTTCTAAACTTGATGCCAGATGACGATACTGTATGCATGTTGGGCATAATTGGACTTGGAGGAATAGGGAAAACTGAAGTTGCCAAAGCATTGTATAACAACATTGTGCACCAATTTGAGGCTGCAAGTTTTCTTGCCAATGTTAGAGAGAAGTGGAACAAAATCAATGGCCCAGAAGATCTAATAAAGACCCTTTTATCAGAGATGTTTGAGCAGCCAGAAACCAAGTGGGGAAGTGCAAGTAAAGGAATCAATGAACTAAAACACAAGCTTGGAAGGACAAAGG 514 0.4066 MVAHQNKFGKESEKIKAWIAALSEVADLKGHPIHTGHENHHVKEIAEKVHANIAPKPLLVGENPVGLDQHIEEVKSLLNLMPDDDTVCMLGIIGLGGIGKTEVAKALYNNIVHQFEAASFLANVREKWNKINGPEDLIKTLLSEMFEQPETKWGSASKGINELKHKLGRTK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21369g00001 171 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 169 IPR044974 GO:0006952
Trme21369g00001 171 Gene3D - 1 55 IPR035897 -
Trme21369g00001 171 Gene3D - 56 171 IPR027417 -
Trme21369g00001 171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 150 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21369g00001 Trme-Chr21369 400 1332 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21369g00001 16 147 WRKY Transcription Factor Family AT4G12020 31.343 3.44e-10 56.2