Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21366g00001 AAACATTTTTTCTACAGTTCAAGATCAAGATTTGAGCAGTCGTTGGTTCGATGGGCGACTCCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTAGAAGGGCTATACCCTGTCAAGTCTCTTTCTCGATTCGCTGATGTCATTGCCCTTTGTGTTCAGCCGGAACCTGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCACTAGTTCGGTTAGTGCAACGAACCAACATGAGCAAACGGACATTTGGAACTGATCAAGGAGGATCCAACCGAGGTGGTGATGACCAAGACACCCTAGACATGTAA 324 0.4568 KHFFYSSRSRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDDQDTLDM 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21366g00001 107 PANTHER OS01G0253100 PROTEIN 12 84 - -
Trme21366g00001 107 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Trme21366g00001 107 SUPERFAMILY Protein kinase-like (PK-like) 12 75 IPR011009 -
Trme21366g00001 107 MobiDBLite consensus disorder prediction 85 99 - -
Trme21366g00001 107 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21366g00001 Trme-Chr21366 1 598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21366g00001 6 97 Strubbelig Receptor Gene Family AT4G22130 77.174 5.08e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21366g00001 - - gmx:100780323 197.208