Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme213562g00001 GGTAACTCGCAAGAGGATAAAGGGCATAAGAAGTTTCGAGGAAGCAAAACCGATATAAATGATGTTTTAAATTCTGTTGTGAGTATTGTTGCGGCTGCAGTCACTATTGTGGTTGTGGCAATCCCTGAGGGTTTGCCATTGGCTGTGACACTCACACTTGCTTACTCCATGAAAAGAATGATGGCAGATAATGCTATGGTGAGGAAACTTTCTGCTTGTGAAACTATGGGATCAGCAACAGTTATCTGCACTGATAAAACTGGTACCTTGACATTAAATCAAATGAGGGTCACCAAGTTTTGTCTTGGCATTGAAAACTTTACCGAAATATTTTCCAATGCAATGGCTCCAAAAGTTCTTGAATTGTTCCATCAAGGG 378 0.4048 GNSQEDKGHKKFRGSKTDINDVLNSVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADNAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFCLGIENFTEIFSNAMAPKVLELFHQG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme213562g00001 126 Gene3D - 8 119 - -
Trme213562g00001 126 PANTHER CATION TRANSPORTING ATPASE 2 126 - -
Trme213562g00001 126 SUPERFAMILY Calcium ATPase, transmembrane domain M 21 96 IPR023298 -
Trme213562g00001 126 ProSitePatterns E1-E2 ATPases phosphorylation site. 85 91 IPR018303 -
Trme213562g00001 126 NCBIfam HAD-IC family P-type ATPase 24 106 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme213562g00001 Trme-Chr213562 45 422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme213562g00001 1 126 Primary Pumps ATPases AT3G63380 72.222 3.80e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme213562g00001 K01537 - gmx:100790034 206.068