Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme213084g00001 ACTCAGGTCCATGCTAGATGCTATGGAGAACTGGAACCTGTTAATGGAGTGCTATGGTTATGCAACTTATGTCGTTCGGGTGCTCCTCCCCCACCTTGTTGCTTATGTCCACTCATAGGTGGTGCAATGAAGCCTACAACGGATGGCCGGTGGGCTCATTTGGCTTGTGCCATGTGGATACCTGAAACTTGCTTAGCTGATGTCAAGAGAATGGAGCCTATTGATGGTTTGAGTAGAATCAGCAAG 246 0.4837 TQVHARCYGELEPVNGVLWLCNLCRSGAPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKRMEPIDGLSRISK 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme213084g00001 82 ProSiteProfiles Extended PHD (ePHD) domain profile. 30 82 IPR034732 -
Trme213084g00001 82 PANTHER PHD FINGER PROTEINS 3 82 - -
Trme213084g00001 82 Pfam PHD-zinc-finger like domain 32 81 - -
Trme213084g00001 82 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 82 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme213084g00001 Trme-Chr213084 9 420 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme213084g00001 3 74 C2H2 Transcription Factor Family AT3G14740 44.156 5.05e-15 66.2