Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme21303g00001 ATGTATGCTTCATCTGATAACTTTTTGAAAGTCTCTCAAAATCAATCTCCTACTGGTTTTTGTATTGATCTTTTCAATGAGATCCGAGAAATTCTGAGTGACCAGTATTCCGGTCTTCCCTATAGATTTTACCCTTTAAATGCATCTTATGATTCAATTCTGCTTAAAGTCATAGATGAGACCTATGATGCTGTTGTAGCAGATATAACAATACTTGCCGACCGATCAAGGAATCTATCATTCACTCAACCATATACTGAGTCAGGCTTATCACTCATGTTTCCTGTTGAAACTGAAGATTCTGCATGGTTGTTTATGAAACCATTTAGCTGGGAAATGTGGATTGCAACTATTGGTATCCTCATCTACACAATGATTATCATTTGGTTCTTGGAACATCGCTTGAATCCAGAATTTGGTGGACCATTGAAAACCCAGATCAGCAACACTCTGTGGTTTGCTTTTTCCTCTCTATTTTCTGTTCATA 487 0.3696 MYASSDNFLKVSQNQSPTGFCIDLFNEIREILSDQYSGLPYRFYPLNASYDSILLKVIDETYDAVVADITILADRSRNLSFTQPYTESGLSLMFPVETEDSAWLFMKPFSWEMWIATIGILIYTMIIIWFLEHRLNPEFGGPLKTQISNTLWFAFSSLFSVH 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme21303g00001 162 Gene3D - 103 162 - -
Trme21303g00001 162 Gene3D - 1 102 - -
Trme21303g00001 162 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 157 IPR015683 -
Trme21303g00001 162 Pfam Bacterial extracellular solute-binding proteins, family 3 13 97 IPR001638 -
Trme21303g00001 162 SUPERFAMILY Periplasmic binding protein-like II 8 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme21303g00001 Trme-Chr21303 246 1074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme21303g00001 11 162 Ion Channels AT2G29120 39.610 1.98e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme21303g00001 - - mtr:11441834 280.796