Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme212888g00001 CACCACCACCGTCCCTCTTCTTCCCCTTTCACCGTTCGTGCCGCACGTGGCAAATTCGAGCGCAAAAAACCTCATCTCAACATCGGTACAATTGGTCACGTCGACCATGGCAAAACCACTTTAACTGCTGCTCTTACTATGGCTCTTGCTTCTCTCGGTAACAGCGCCCCTAAAAAATACGATGAAATTGACGCTGCTCCTGAAGAGCGTGCTCGTGGAATTACTATTAATACTGCTACTGTTGAATATGAGACCGAAACTCGTCACTATGCTCATGTTGATTGCCCTGGTCACGCTGATTATGTTAAGAATATGATCACCGGTGCTGCTCAAATGGACGGCGCTATCCTCGTTGTCTCCGGTGCTGATGGTCCCATGCCTCAAACCAAAGAACACATCCTTCTCGCCAAACAG 414 0.4879 HHHRPSSSPFTVRAARGKFERKKPHLNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQ 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme212888g00001 138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 137 IPR027417 -
Trme212888g00001 138 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 23 138 IPR000795 GO:0003924|GO:0005525
Trme212888g00001 138 Pfam Elongation factor Tu GTP binding domain 23 138 IPR000795 GO:0003924|GO:0005525
Trme212888g00001 138 Gene3D - 14 138 IPR027417 -
Trme212888g00001 138 PRINTS GTP-binding elongation factor signature 71 79 IPR000795 GO:0003924|GO:0005525
Trme212888g00001 138 PRINTS GTP-binding elongation factor signature 91 101 IPR000795 GO:0003924|GO:0005525
Trme212888g00001 138 PRINTS GTP-binding elongation factor signature 107 118 IPR000795 GO:0003924|GO:0005525
Trme212888g00001 138 PRINTS GTP-binding elongation factor signature 27 40 IPR000795 GO:0003924|GO:0005525
Trme212888g00001 138 PANTHER ELONGATION FACTOR TU-RELATED 17 137 - -
Trme212888g00001 138 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 64 79 IPR031157 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme212888g00001 21 136 Eukaryotic Initiation Factors Gene Family AT1G07930 35.507 2.78e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme212888g00001 K02358 - aew:130750078 255.373